Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Marivita geojedonensis DPG-138, or try another query
MGEO_RS17335 MGEO_17250 WP_085640705.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 44% id, 100% cov |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 44% id, 100% cov |
Pf6N2E2_609: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 44% id, 100% cov |
ilvD MGEO_RS01140 MGEO_01130 WP_085634854.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 34% id, 97% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 35% id, 93% cov |
Pf6N2E2_609: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 35% id, 90% cov |
MGEO_RS08380 MGEO_08350 WP_085636267.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 34% id, 89% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 32% id, 88% cov |
edd MGEO_RS10995 MGEO_10945 WP_085637224.1: phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 30% id, 87% cov |
HSERO_RS05205: L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae | 30% id, 85% cov |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 29% id, 88% cov |
MGEO_RS04825 MGEO_04810 WP_085635558.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 25% id, 87% cov |
MGEO_RS06650 MGEO_06615 WP_085635947.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 19% id, 90% cov |
MGEO_RS03455 MGEO_03430 WP_085635323.1: muconate/chloromuconate family cycloisomerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 22% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory