Curated BLAST for Genomes

 

Curated BLAST

Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)

Found 1 curated entries in PaperBLAST's database that match 'N-acetylcitrulline deacetylase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Marivita geojedonensis DPG-138, or try another query

argE MGEO_RS10755 MGEO_10705 WP_085637148.1: acetylornithine deacetylase
is similar to:
PaperBLAST

ABZR86_RS08710: N-acetylcitrulline deacetylase (EC 3.5.1.-) from Dyella japonica

31% id,
90% cov

argE MGEO_RS05565 MGEO_05545 WP_085635729.1: acetylornithine deacetylase
is similar to:
PaperBLAST

ABZR86_RS08710: N-acetylcitrulline deacetylase (EC 3.5.1.-) from Dyella japonica

27% id,
99% cov

argE MGEO_RS13260 MGEO_13205 WP_085638538.1: acetylornithine deacetylase
is similar to:
PaperBLAST

ABZR86_RS08710: N-acetylcitrulline deacetylase (EC 3.5.1.-) from Dyella japonica

29% id,
90% cov

MGEO_RS01485 MGEO_01475 WP_085634918.1: acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein
is similar to:
PaperBLAST

ABZR86_RS08710: N-acetylcitrulline deacetylase (EC 3.5.1.-) from Dyella japonica

31% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory