Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)
Found 1 curated entries in PaperBLAST's database that match 'acetohydroxyacid synthase subunit B' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Marivita geojedonensis DPG-138, or try another query
MGEO_RS06270 MGEO_06235 WP_085635848.1: acetolactate synthase 3 large subunit is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 53% id, 96% cov |
MGEO_RS19930 MGEO_19820 WP_085641493.1: 5-guanidino-2-oxopentanoate decarboxylase is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 29% id, 92% cov |
MGEO_RS04765 MGEO_04750 WP_085635546.1: thiamine pyrophosphate-binding protein is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 93% cov |
xsc MGEO_RS02505 MGEO_02485 WP_085635100.1: sulfoacetaldehyde acetyltransferase is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 91% cov |
MGEO_RS06620 MGEO_06585 WP_085635941.1: thiamine pyrophosphate-binding protein is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 25% id, 94% cov |
MGEO_RS07590 MGEO_07555 WP_085636118.1: thiamine pyrophosphate-binding protein is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 39% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
6128-7816 (frame -1) on NZ_JFKC01000037.1 Marivita geojedonensis strain DPG-138 contig37, whole genome shotgun sequence is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 29% id, 94% cov |
504554-506422 (frame -3) on NZ_JFKC01000001.1 Marivita geojedonensis strain DPG-138 contig1, whole genome shotgun sequence is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 93% cov |
325796-327496 (frame -1) on NZ_JFKC01000002.1 Marivita geojedonensis strain DPG-138 contig2, whole genome shotgun sequence is similar to: | PaperBLAST |
ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator | 26% id, 96% cov |
Lawrence Berkeley National Laboratory