Curated BLAST for Genomes

 

Curated BLAST

Searching in Marivita geojedonensis DPG-138 (GCF_002115805.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Marivita geojedonensis DPG-138, or try another query

MGEO_RS11340 MGEO_11290 WP_085637398.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

76% id,
98% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

55% id,
98% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

42% id,
99% cov

carA MGEO_RS07320 MGEO_07285 WP_085636069.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

33% id,
93% cov

MGEO_RS08645 MGEO_08615 WP_085636327.1: type 1 glutamine amidotransferase
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

59% id,
14% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

52% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory