Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Methylocystis bryophila S285 (GCF_002117405.1)

Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).

These curated entries have 63 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylocystis bryophila S285, or try another query

mdh B1812_RS20390 B1812_20510 WP_085773219.1: malate dehydrogenase is similar to:	PaperBLAST
Q8I8U5: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria acervulina	51% id, 98% cov
Q9GT92: L-lactate dehydrogenase (EC 1.1.1.27) from Cryptosporidium parvum	51% id, 96% cov
Q8I8U4: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria tenella	51% id, 95% cov
Q27797: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	51% id, 94% cov
Q8I8U3: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria maxima	47% id, 97% cov
CH_024078: L-lactate dehydrogenase; EC 1.1.1.27 from Babesia bovis Q7Z0X7: L-lactate dehydrogenase (EC 1.1.1.27) from Babesia bovis	47% id, 95% cov
P90613: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	45% id, 97% cov
LDH_PLABA / Q7SI97: L-lactate dehydrogenase; EC 1.1.1.27 from Plasmodium berghei	45% id, 97% cov
LDH: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum LDH / GB\|ABA46354.1: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum	44% id, 98% cov
LDH_THET8 / Q5SJA1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus thermophilus	33% id, 98% cov
ldh / P78007: L-lactate dehydrogenase (EC 1.1.1.27) from Mycoplasma pneumoniae	33% id, 100% cov
LDH_THEMA / P16115: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermotoga maritima	34% id, 95% cov
LDH_THECA / P06150: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus caldophilus	33% id, 98% cov
LDH_THEAQ / P13715: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus aquaticus	33% id, 99% cov
A0A2U9AUU1: L-lactate dehydrogenase (EC 1.1.1.27) from Lacticaseibacillus casei	33% id, 96% cov
ldhA: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactococcus lactis	34% id, 95% cov
LDH1_STAAC / Q5HJD7: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus LDH1_STAAE / A6QDL6: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus	32% id, 98% cov
LDH_DEIRA / P50933: L-lactate dehydrogenase; L-LDH; 2-ketoacid:NAD-dependent dehydrogenase; EC 1.1.1.27 from Deinococcus radiodurans	32% id, 98% cov
LDH_LACCA / P00343: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lacticaseibacillus casei ldh / P00343: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Lactobacillus casei	33% id, 95% cov
LDH_PEDAC / Q59645: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Pediococcus acidilactici	32% id, 98% cov
P59390: L-lactate dehydrogenase (EC 1.1.1.27) from Lactiplantibacillus plantarum	31% id, 99% cov
B9MKZ8: L-lactate dehydrogenase (EC 1.1.1.27) from Caldicellulosiruptor bescii	31% id, 98% cov
P07864: L-lactate dehydrogenase (EC 1.1.1.27) from Homo sapiens	33% id, 92% cov
A0A1A6GB48: L-lactate dehydrogenase (EC 1.1.1.27) from Enterococcus mundtii	31% id, 97% cov
LDH_BACSU / P13714: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Bacillus subtilis	31% id, 96% cov
B1A4R6: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacter ethanolicus	30% id, 98% cov
LDH_STRP2 / Q04K99: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae LDH_STRPN / P0A3M9: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Streptococcus pneumoniae	30% id, 97% cov
LDH_LACLN / D8KFT1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactococcus lactis	29% id, 99% cov
ldh1: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactobacillus plantarum	30% id, 96% cov
LDH_GEOSE / P00344: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Geobacillus stearothermophilus	30% id, 97% cov
ldh / P26283: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Streptococcus mutans P26283: L-lactate dehydrogenase (EC 1.1.1.27) from Streptococcus mutans	30% id, 95% cov
P00345: L-lactate dehydrogenase (EC 1.1.1.27) from Priestia megaterium	30% id, 95% cov
W8CXQ9: L-lactate dehydrogenase (EC 1.1.1.27) from Weizmannia coagulans	30% id, 96% cov
Q5FMB0: L-lactate dehydrogenase (EC 1.1.1.27) from Lactobacillus acidophilus	30% id, 95% cov
LDH_LACPE / P56511: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactiplantibacillus pentosus ldh: L-lactate dehydrogenase; EC 1.1.1.27 from Lactobacillus pentosus	30% id, 96% cov
LDH2_STAAC / Q5HCV0: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus LDH2_STAAE / A6QK89: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus	29% id, 97% cov
LDH_LACHE / O32765: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactobacillus helveticus	30% id, 95% cov
LDH6A_HUMAN / Q6ZMR3: L-lactate dehydrogenase A-like 6A; LDHA-like protein 6A; EC 1.1.1.27 from Homo sapiens	30% id, 92% cov
Q8CMZ0: L-lactate dehydrogenase (EC 1.1.1.27) from Staphylococcus epidermidis	28% id, 98% cov
More...

glcF B1812_RS02120 B1812_02120 WP_085770131.1: glycolate oxidase subunit GlcF is similar to:	PaperBLAST
lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis	26% id, 99% cov
Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae	21% id, 92% cov

lldD B1812_RS07210 B1812_07235 WP_085770992.1: FMN-dependent L-lactate dehydrogenase LldD is similar to:	PaperBLAST
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	36% id, 47% cov
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	32% id, 45% cov

guaB B1812_RS20120 B1812_20245 WP_085773172.1: IMP dehydrogenase is similar to:	PaperBLAST
Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans	29% id, 31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4327839-4328948 (frame -3) on NZ_CP019948.1 Methylocystis bryophila strain S285 chromosome, complete genome is similar to:	PaperBLAST
Q8I8U5: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria acervulina Also see hits to annotated proteins above	50% id, 100% cov
Q8I8U4: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria tenella Also see hits to annotated proteins above	51% id, 96% cov
Q27797: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii Also see hits to annotated proteins above	50% id, 97% cov
E7CXT1: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacterium saccharolyticum	32% id, 99% cov
P07864: L-lactate dehydrogenase (EC 1.1.1.27) from Homo sapiens Also see hits to annotated proteins above	32% id, 95% cov
A0A1A6GB48: L-lactate dehydrogenase (EC 1.1.1.27) from Enterococcus mundtii Also see hits to annotated proteins above	31% id, 98% cov
LDH_LACHE / O32765: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactobacillus helveticus Also see hits to annotated proteins above	30% id, 97% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory