Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocystis bryophila S285 (GCF_002117405.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylocystis bryophila S285, or try another query

argE B1812_RS10970 B1812_11020 WP_085771629.1: acetylornithine deacetylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

38% id,
97% cov

ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli
ArgE / b3957: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli
argE / P23908: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli

32% id,
89% cov

Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana

23% id,
44% cov

dapE B1812_RS02270 B1812_02270 WP_085770154.1: succinyl-diaminopimelate desuccinylase
is similar to:
PaperBLAST

Q92Y75: acetylornithine deacetylase (EC 3.5.1.16) from Sinorhizobium meliloti

27% id,
89% cov

ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli
ArgE / b3957: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli
argE / P23908: acetylornithine deacetylase (EC 3.5.1.16) from Escherichia coli

27% id,
74% cov

Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana

23% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory