Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocystis bryophila S285 (GCF_002117405.1)

Found 62 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Methylocystis bryophila S285, or try another query

B1812_RS05255 B1812_05275 WP_085770649.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

66% id,
100% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

65% id,
100% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

65% id,
100% cov

More...

B1812_RS13170 B1812_13225 WP_085772004.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

FADJ_ECOLI / P77399: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 1.1.1.35 from Escherichia coli
FadJ / b2341: 3-hydroxyacyl-CoA dehydrogenase FadJ (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli
fadJ / RF|NP_416843: fatty acid oxidation complex subunit alpha; EC 1.1.1.35; EC 4.2.1.17; EC 5.1.2.3 from Escherichia coli
fadJ / P77399: multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxyacyl-CoA epimerase/enoyl-CoA hydratase FadJ (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli

36% id,
98% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

33% id,
99% cov

HP15_1512: Enoyl-CoA hydratase (EC 4.2.1.17) from Marinobacter adhaerens

33% id,
98% cov

More...

B1812_RS16295 B1812_16390 WP_085773782.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

ECH_THET8 / Q5SKU3: Putative enoyl-CoA hydratase; TtECH; EC 4.2.1.17 from Thermus thermophilus

35% id,
97% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

33% id,
100% cov

paaG / MB|P77467: putative enoyl-CoA hydratase PaaG; EC 4.2.1.17 from Escherichia coli

32% id,
100% cov

More...

B1812_RS17255 B1812_17355 WP_085772689.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

ECH14_MYCBO / P64019: Probable enoyl-CoA hydratase echA14; EC 4.2.1.17 from Mycobacterium bovis

34% id,
96% cov

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

32% id,
96% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

31% id,
95% cov

More...

B1812_RS02275 B1812_02275 WP_085770155.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

33% id,
98% cov

ECH_THET8 / Q5SKU3: Putative enoyl-CoA hydratase; TtECH; EC 4.2.1.17 from Thermus thermophilus

32% id,
100% cov

Q9I5I4: enoyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas aeruginosa

34% id,
95% cov

More...

scpB B1812_RS00705 B1812_00700 WP_085769878.1: methylmalonyl-CoA decarboxylase
is similar to:
PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

32% id,
100% cov

paaG / MB|P77467: putative enoyl-CoA hydratase PaaG; EC 4.2.1.17 from Escherichia coli

32% id,
96% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

31% id,
96% cov

More...

B1812_RS16315 B1812_16410 WP_085772528.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q9SE41: enoyl-CoA hydratase (EC 4.2.1.17) from Avicennia marina

32% id,
88% cov

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

27% id,
97% cov

Tfu_0067 / Q47TV9: enoyl-CoA hydratase (EC 4.2.1.17) from Thermobifida fusca

27% id,
93% cov

More...

B1812_RS04155 B1812_04170 WP_085773494.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

37% id,
41% cov

fadB / Q88L02: FadB (EC 5.3.3.8; EC 1.1.1.35; EC 5.1.2.3; EC 4.2.1.17; EC 1.1.1.36) from Pseudomonas putida

37% id,
40% cov

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

37% id,
39% cov

More...

B1812_RS19300 B1812_19425 WP_085773028.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

HP15_1512: Enoyl-CoA hydratase (EC 4.2.1.17) from Marinobacter adhaerens

38% id,
39% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

38% id,
39% cov

ECHP_RAT / P07896: Peroxisomal bifunctional enzyme; PBE; PBFE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Rattus norvegicus
Ehhadh / RF|NP_598290.1: noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus
P07896: enoyl-CoA hydratase (EC 4.2.1.17) from Rattus norvegicus

37% id,
39% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory