Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocystis bryophila S285 (GCF_002117405.1)

Found 3 curated entries in PaperBLAST's database that match 'N-succinylglutamylphosphate reductase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylocystis bryophila S285, or try another query

argC B1812_RS15610 B1812_15690 WP_085772417.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

Echvi_3847: N-succinylglutamylphosphate reductase (EC 1.2.1.-) from Echinicola vietnamensis

30% id,
93% cov

CA265_RS18540: N-succinylglutamylphosphate reductase (EC 1.2.1.38) from Pedobacter sp.

27% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3280040-3281005 (frame +2) on NZ_CP019948.1 Methylocystis bryophila strain S285 chromosome, complete genome
is similar to:
PaperBLAST

Echvi_3847: N-succinylglutamylphosphate reductase (EC 1.2.1.-) from Echinicola vietnamensis
Also see hits to annotated proteins above

30% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory