Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocystis bryophila S285 (GCF_002117405.1)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%large' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylocystis bryophila S285, or try another query

carB B1812_RS14740 B1812_14820 WP_085772264.1: carbamoyl-phosphate synthase large subunit
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

45% id,
90% cov

accC B1812_RS04040 B1812_04050 WP_085770455.1: acetyl-CoA carboxylase biotin carboxylase subunit
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

24% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory