Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 3 curated entries in PaperBLAST's database that match '1.1.1.368' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Halomonas desiderata SP1, or try another query

adhP BZY95_RS11780 BZY95_11815 WP_086510112.1: alcohol dehydrogenase AdhP
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

30% id,
92% cov

BZY95_RS21640 BZY95_21755 WP_217873878.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

25% id,
92% cov

BZY95_RS21175 BZY95_21290 WP_086511871.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

27% id,
56% cov

fdhA BZY95_RS06260 BZY95_06280 WP_086509112.1: formaldehyde dehydrogenase, glutathione-independent
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

28% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory