Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Halomonas desiderata SP1, or try another query

kduD BZY95_RS06205 BZY95_06225 WP_086509102.1: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

32% id,
98% cov

BZY95_RS21330 BZY95_21445 WP_086511901.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
98% cov

BZY95_RS13915 BZY95_13990 WP_176342882.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
97% cov

BZY95_RS19090 BZY95_19205 WP_086511471.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
99% cov

BZY95_RS06145 BZY95_06165 WP_086509091.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
98% cov

BZY95_RS16600 BZY95_16695 WP_086511007.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
94% cov

BZY95_RS13120 BZY95_13160 WP_176342870.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
95% cov

BZY95_RS01345 BZY95_01350 WP_086508208.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
96% cov

BZY95_RS06775 BZY95_06795 WP_086509208.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
97% cov

BZY95_RS06195 BZY95_06215 WP_086509100.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
96% cov

BZY95_RS02155 BZY95_02165 WP_086508365.1: 3-oxoacyl-ACP reductase family protein
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

35% id,
72% cov

benD BZY95_RS21535 BZY95_21650 WP_086511939.1: benzoate diol dehydrogenase BenD
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

25% id,
96% cov

BZY95_RS02150 BZY95_02160 WP_140162431.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

36% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory