Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 2 curated entries in PaperBLAST's database that match '1.1.1.378' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 30 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS20380 BZY95_20500 WP_086511720.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 39% id,
97% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 36% id,
98% cov

kduD BZY95_RS06205 BZY95_06225 WP_086509102.1: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 38% id,
97% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 37% id,
96% cov

BZY95_RS13120 BZY95_13160 WP_176342870.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 38% id,
96% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 38% id,
95% cov

BZY95_RS21565 BZY95_21680 WP_086511944.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 36% id,
98% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 34% id,
99% cov

BZY95_RS04820 BZY95_04835 WP_086508841.1: glucose 1-dehydrogenase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 36% id,
96% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 34% id,
98% cov

BZY95_RS06145 BZY95_06165 WP_086509091.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 35% id,
97% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 34% id,
96% cov

BZY95_RS21330 BZY95_21445 WP_086511901.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 34% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 32% id,
98% cov

BZY95_RS19090 BZY95_19205 WP_086511471.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 33% id,
99% cov

BZY95_RS01345 BZY95_01350 WP_086508208.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 34% id,
96% cov

BZY95_RS16600 BZY95_16695 WP_086511007.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 33% id,
96% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 33% id,
97% cov

BZY95_RS08060 BZY95_08090 WP_176342812.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 33% id,
96% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 30% id,
95% cov

BZY95_RS11520 BZY95_11555 WP_086510070.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 33% id,
95% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 32% id,
90% cov

BZY95_RS06195 BZY95_06215 WP_086509100.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 32% id,
98% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 29% id,
88% cov

BZY95_RS04650 BZY95_04665 WP_086508810.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 32% id,
97% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 34% id,
67% cov

benD BZY95_RS21535 BZY95_21650 WP_086511939.1: benzoate diol dehydrogenase BenD
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 31% id,
96% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 31% id,
96% cov

BZY95_RS06715 BZY95_06735 WP_010626117.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 31% id,
99% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 31% id,
98% cov

BZY95_RS02350 BZY95_02360 WP_086508400.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 31% id,
98% cov

BZY95_RS12005 BZY95_12040 WP_086510166.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 31% id,
94% cov

BZY95_RS02155 BZY95_02165 WP_086508365.1: 3-oxoacyl-ACP reductase family protein
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 38% id,
73% cov

BZY95_RS06775 BZY95_06795 WP_086509208.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 28% id,
98% cov

BZY95_RS18350 BZY95_18455 WP_086511339.1: YciK family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 29% id,
83% cov

BZY95_RS17235 BZY95_17335 WP_140162525.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 43% id,
57% cov

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 38% id,
59% cov

BZY95_RS08205 BZY95_08235 WP_176342813.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 27% id,
87% cov

BZY95_RS00325 BZY95_00330 WP_086508010.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 30% id,
77% cov

BZY95_RS12585 BZY95_12625 WP_086510274.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 29% id,
77% cov

BZY95_RS01390 BZY95_01395 WP_086508216.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 30% id,
74% cov

BZY95_RS12845 BZY95_12885 WP_086510320.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 28% id,
74% cov

BZY95_RS00720 BZY95_00725 WP_086508087.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 27% id,
75% cov

BZY95_RS02150 BZY95_02160 WP_140162431.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 44% id,
26% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 39% id,
26% cov

BZY95_RS03330 BZY95_03340 WP_140162433.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

lra1 / C1DMX5: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii

 39% id,
26% cov

lra1 / Q1NEJ0: NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.

 39% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 26 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory