Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS07140 BZY95_07160 WP_086509265.1: 2Fe-2S iron-sulfur cluster-binding protein
is similar to:
PaperBLAST

P23103: catechol 2,3-dioxygenase (EC 1.13.11.2) from Pseudomonas putida

38% id,
71% cov

BZY95_RS06730 BZY95_06750 WP_086509200.1: VOC family protein
is similar to:
PaperBLAST

Q4J6K0: catechol 2,3-dioxygenase (EC 1.13.11.2) from Sulfolobus acidocaldarius

26% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory