Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 20 curated entries in PaperBLAST's database that match '1.13.11.5' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Halomonas desiderata SP1, or try another query

hmgA BZY95_RS06625 BZY95_06645 WP_086509181.1: homogentisate 1,2-dioxygenase is similar to:	PaperBLAST
HGD_PSEPK / Q88E47: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida Q88E47: homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas putida	63% id, 99% cov
HGD_PSEPU / Q6EMI9: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida	62% id, 99% cov
Pf6N2E2_5290: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens	62% id, 98% cov
RR42_RS31275: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Cupriavidus basilensis	63% id, 96% cov
PfGW456L13_4962: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens	61% id, 99% cov
AO353_15550: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas fluorescens	60% id, 99% cov
HGD_RHIME / Q9X4F5: Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Rhizobium meliloti	59% id, 94% cov
HGD_CAEEL / Q9Y041: Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Caenorhabditis elegans	55% id, 98% cov
HGD_MOUSE / O09173: Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Mus musculus	54% id, 98% cov
B8YB76: homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Bos taurus	54% id, 98% cov
HGD_HUMAN / Q93099: Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Homo sapiens HGD / Q93099: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Homo sapiens	53% id, 98% cov
HGD_EMENI / Q00667: Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Emericella nidulans GI\|2832726: homogentisate dioxygenase; EC 1.13.11.5; EC 1.13.11.15 from Emericella nidulans	53% id, 97% cov
HMGA_ASPFU / Q4WHT9: Homogentisate 1,2-dioxygenase hmgA; Homogentisate oxygenase hmgA; Homogentisic acid oxidase hmgA; Homogentisicase hmgA; L-tyrosine degradation gene cluster protein hmgA; Pyomelanin biosynthesis cluster protein hmgA; EC 1.13.11.5 from Aspergillus fumigatus	53% id, 96% cov
Q9ZRA2: homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Arabidopsis thaliana	53% id, 94% cov
Q6JDV6: homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Exophiala lecanii-corni	50% id, 92% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory