Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 8 curated entries in PaperBLAST's database that match '1.13.12.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS02515 BZY95_02525 WP_086508430.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

35% id,
11% cov

BZY95_RS05900 BZY95_05920 WP_306766560.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

W6JQJ6: lysine 2-monooxygenase (EC 1.13.12.2); L-amino-acid oxidase (EC 1.4.3.2) from Pseudomonas sp.

50% id,
7% cov

Pf1N1B4_2505: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

48% id,
7% cov

AO353_07420: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens

48% id,
7% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory