Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 36 curated entries in PaperBLAST's database that match '1.2.1.88' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Halomonas desiderata SP1, or try another query

putA BZY95_RS15250 BZY95_15325 WP_086510760.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

59% id,
100% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

59% id,
99% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

59% id,
100% cov

More...

betB BZY95_RS10630 BZY95_10660 WP_086509897.1: betaine-aldehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

34% id,
92% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
92% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

32% id,
92% cov

More...

BZY95_RS07130 BZY95_07150 WP_200825325.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

34% id,
91% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

33% id,
94% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
92% cov

More...

BZY95_RS10455 BZY95_10485 WP_086509869.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

35% id,
89% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
90% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

32% id,
92% cov

More...

BZY95_RS20670 BZY95_20790 WP_086511774.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
93% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

32% id,
91% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

30% id,
92% cov

More...

BZY95_RS09490 BZY95_09520 WP_086509699.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
91% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

33% id,
89% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

32% id,
90% cov

More...

BZY95_RS11785 BZY95_11820 WP_086510113.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

34% id,
90% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

32% id,
90% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

32% id,
89% cov

More...

BZY95_RS20815 BZY95_20935 WP_086511804.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

33% id,
91% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

33% id,
90% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

33% id,
90% cov

More...

BZY95_RS10050 BZY95_10080 WP_086509800.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

34% id,
89% cov

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

32% id,
91% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

31% id,
91% cov

More...

BZY95_RS15485 BZY95_15560 WP_086510804.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

32% id,
92% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

32% id,
91% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

32% id,
88% cov

More...

BZY95_RS01885 BZY95_01895 WP_086508312.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

32% id,
93% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

31% id,
93% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

31% id,
93% cov

More...

BZY95_RS16190 BZY95_16275 WP_086510928.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

32% id,
92% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

32% id,
89% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

30% id,
93% cov

More...

BZY95_RS05955 BZY95_05975 WP_086509055.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

30% id,
96% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

31% id,
88% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

29% id,
93% cov

More...

BZY95_RS11585 BZY95_11620 WP_176342854.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

30% id,
92% cov

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

31% id,
89% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

30% id,
91% cov

More...

astD BZY95_RS01060 BZY95_01065 WP_086508153.1: succinylglutamate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

30% id,
90% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

28% id,
92% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

29% id,
89% cov

More...

BZY95_RS06705 BZY95_06725 WP_340148149.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

37% id,
67% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

36% id,
67% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

35% id,
67% cov

More...

BZY95_RS09115 BZY95_09145 WP_086509630.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

27% id,
90% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

27% id,
89% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

26% id,
91% cov

More...

BZY95_RS02005 BZY95_02015 WP_086508338.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus

28% id,
84% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

28% id,
81% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

29% id,
79% cov

More...

BZY95_RS14765 BZY95_14840 WP_086510671.1: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

26% id,
90% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

25% id,
90% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

25% id,
87% cov

More...

BZY95_RS06200 BZY95_06220 WP_086509101.1: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

25% id,
90% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

25% id,
88% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

24% id,
88% cov

More...

paaZ BZY95_RS06870 BZY95_06890 WP_086509216.1: phenylacetic acid degradation bifunctional protein PaaZ
is similar to:
PaperBLAST

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

25% id,
70% cov

Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp.

25% id,
36% cov

RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis

28% id,
28% cov

BZY95_RS16590 BZY95_16685 WP_140162518.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

27% id,
46% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

27% id,
45% cov

Q65NN2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Bacillus licheniformis

27% id,
43% cov

More...

BZY95_RS22940 WP_340148148.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q9RW56: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Deinococcus radiodurans

34% id,
26% cov

Q9K9B2: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Alkalihalobacillus halodurans

30% id,
26% cov

ROCA2_BACSU / P94391: 1-pyrroline-5-carboxylate dehydrogenase 2; P5C dehydrogenase 2; L-glutamate gamma-semialdehyde dehydrogenase; EC 1.2.1.88 from Bacillus subtilis

30% id,
25% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

38504-40204 (frame -1) on NZ_MUMZ01000036.1 Halomonas desiderata SP1 contig_36, whole genome shotgun sequence
is similar to:
PaperBLAST

Q72IB9: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Thermus thermophilus
Also see hits to annotated proteins above

29% id,
99% cov

A9S190: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88) from Physcomitrium patens
Also see hits to annotated proteins above

25% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory