Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 44 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS20125 BZY95_20240 WP_086511672.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

27% id,
24% cov

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

30% id,
21% cov

BZY95_RS09110 BZY95_09140 WP_086509629.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

39% id,
13% cov

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

33% id,
14% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

33% id,
14% cov

More...

BZY95_RS16070 BZY95_16155 WP_086510905.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

49% id,
9% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

50% id,
7% cov

BZY95_RS10510 BZY95_10540 WP_086509880.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

49% id,
8% cov

BZY95_RS14840 BZY95_14915 WP_234251585.1: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

46% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory