Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 5 curated entries in PaperBLAST's database that match '1.4.3.25' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS08665 BZY95_08695 WP_086509542.1: NADH:flavin oxidoreductase
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

33% id,
18% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

33% id,
16% cov

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

38% id,
13% cov

BZY95_RS02655 BZY95_02665 WP_086508467.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

30% id,
15% cov

BZY95_RS13790 BZY95_13865 WP_086510494.1: sarcosine oxidase subunit alpha family protein
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

48% id,
8% cov

BZY95_RS03135 BZY95_03145 WP_306766553.1: NADPH-dependent 2,4-dienoyl-CoA reductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

49% id,
8% cov

BZY95_RS05900 BZY95_05920 WP_306766560.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

49% id,
7% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

54% id,
7% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

54% id,
6% cov

dgcA BZY95_RS06230 BZY95_06250 WP_086509106.1: dimethylglycine demethylation protein DgcA
is similar to:
PaperBLAST

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

34% id,
10% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

42% id,
8% cov

BZY95_RS17555 BZY95_17655 WP_086511190.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

53% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory