Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Halomonas desiderata SP1, or try another query
| dapD BZY95_RS07625 BZY95_07645 WP_086509350.1: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase is similar to: | PaperBLAST |
DAPD_PSEAE / G3XD76: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Pseudomonas aeruginosa | 69% id, 99% cov |
DAPD_MYCTU / P9WP21: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Mycobacterium tuberculosis | 51% id, 97% cov |
Q8NRE3: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Corynebacterium glutamicum | 56% id, 84% cov |
| BZY95_RS04320 BZY95_04335 WP_086508764.1: acetyltransferase is similar to: | PaperBLAST |
P31852: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Pseudomonas amygdali | 32% id, 44% cov |
DAPD_UNKP / P56220: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Unknown prokaryotic | 25% id, 42% cov |
DAPD_ECOLI / P0A9D8: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA: tetrahydrodipicolinate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Escherichia coli | 25% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 32168-33085 (frame -2) on NZ_MUMZ01000005.1 Halomonas desiderata SP1 contig_5, whole genome shotgun sequence is similar to: | PaperBLAST |
P31852: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Pseudomonas amygdali | 31% id, 41% cov |
Lawrence Berkeley National Laboratory