Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS13540 BZY95_13615 WP_086510452.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

75% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

70% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

64% id,
100% cov

More...

pcaF BZY95_RS21635 BZY95_21750 WP_086511957.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

68% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

48% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

46% id,
99% cov

More...

pcaF BZY95_RS03570 BZY95_03585 WP_086508612.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

66% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

47% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

46% id,
100% cov

More...

pcaF BZY95_RS06835 BZY95_06855 WP_010626093.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

66% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

48% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

47% id,
100% cov

More...

fadA BZY95_RS15085 BZY95_15160 WP_086510729.1: acetyl-CoA C-acyltransferase FadA
is similar to:
PaperBLAST

HP15_1513: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Marinobacter adhaerens

65% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

64% id,
100% cov

P28790: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Pseudomonas fragi

63% id,
100% cov

More...

BZY95_RS02365 BZY95_02375 WP_086508403.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

59% id,
100% cov

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

59% id,
98% cov

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

58% id,
100% cov

More...

BZY95_RS09850 BZY95_09880 WP_086509762.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

55% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

45% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

43% id,
100% cov

More...

bktB BZY95_RS08435 BZY95_08465 WP_086509503.1: beta-ketothiolase BktB
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

55% id,
99% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

47% id,
100% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

47% id,
100% cov

More...

BZY95_RS02555 BZY95_02565 WP_086508438.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

HP15_1513: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Marinobacter adhaerens

42% id,
97% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

39% id,
99% cov

P28790: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Pseudomonas fragi

39% id,
98% cov

More...

fadB BZY95_RS15080 BZY95_15155 WP_086510728.1: fatty acid oxidation complex subunit alpha FadB
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
94% cov

BZY95_RS16875 BZY95_16970 WP_086511059.1: hydroxymethylglutaryl-CoA reductase, degradative
is similar to:
PaperBLAST

mvaE / Q9FD70: acetyl-CoA acetyltransferase/HMG-CoA reductase (EC 1.1.1.34; EC 2.3.1.16) from Enterococcus faecalis

43% id,
51% cov

BZY95_RS17495 BZY95_17595 WP_086511177.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
37% cov

BZY95_RS21610 BZY95_21725 WP_254914262.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

29% id,
46% cov

BZY95_RS09855 BZY95_09885 WP_086509763.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
38% cov

BZY95_RS17490 BZY95_17590 WP_086511176.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

38% id,
29% cov

BZY95_RS21580 BZY95_21695 WP_086511947.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

36% id,
30% cov

BZY95_RS21575 BZY95_21690 WP_086511946.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
32% cov

BZY95_RS20370 BZY95_20490 WP_086511718.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

30% id,
33% cov

BZY95_RS09890 BZY95_09920 WP_086509770.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

38% id,
26% cov

paaF BZY95_RS06815 BZY95_06835 WP_086509213.1: 2,3-dehydroadipyl-CoA hydratase PaaF
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

35% id,
27% cov

paaG BZY95_RS06820 BZY95_06840 WP_086509214.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

25% id,
28% cov

BZY95_RS10660 BZY95_10690 WP_086509903.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
23% cov

BZY95_RS10650 BZY95_10680 WP_086509901.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

29% id,
24% cov

BZY95_RS20855 BZY95_20975 WP_086511809.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

28% id,
23% cov

fabF BZY95_RS13190 BZY95_13230 WP_086510385.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

45% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

17910-20129 (frame +3) on NZ_MUMZ01000104.1 Halomonas desiderata SP1 contig_104, whole genome shotgun sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

32% id,
98% cov

4820-5737 (frame -2) on NZ_MUMZ01000145.1 Halomonas desiderata SP1 contig_145, whole genome shotgun sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

29% id,
35% cov

115980-116888 (frame -2) on NZ_MUMZ01000065.1 Halomonas desiderata SP1 contig_65, whole genome shotgun sequence
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

29% id,
27% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory