Curated BLAST
Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 25 curated entries in PaperBLAST's database that match '2.4.2.2' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Halomonas desiderata SP1, or try another query
deoA BZY95_RS14230 BZY95_14310 WP_086510573.1: thymidine phosphorylase
is similar to: | PaperBLAST |
Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 57% id,
99% cov |
Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 45% id,
100% cov |
Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 44% id,
100% cov |
A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei | 43% id,
99% cov |
A0A0D1XZI7: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Aneurinibacillus migulanus | 42% id,
99% cov |
A0A178U4P5: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Parageobacillus thermoglucosidasius | 42% id,
99% cov |
PDP_GEOSE / P77836: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Geobacillus stearothermophilus
pyn / GB|BAA13512.1: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Geobacillus stearothermophilus
pdp / P77836: pyrimidine-nucleoside phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Geobacillus stearothermophilus
P77836: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Geobacillus stearothermophilus | 42% id,
99% cov |
PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis
pdp / GB|CAB15976.2: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Bacillus subtilis | 42% id,
99% cov |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 44% id,
91% cov |
More... |
BZY95_RS15125 BZY95_15200 WP_086510737.1: thymidine phosphorylase family protein
is similar to: | PaperBLAST |
Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 32% id,
92% cov |
Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus | 32% id,
93% cov |
A0A0D1XZI7: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Aneurinibacillus migulanus | 31% id,
91% cov |
A0A178U4P5: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Parageobacillus thermoglucosidasius | 30% id,
91% cov |
PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis
pdp / GB|CAB15976.2: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Bacillus subtilis | 29% id,
91% cov |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 31% id,
88% cov |
A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei | 28% id,
91% cov |
PDP_GEOSE / P77836: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Geobacillus stearothermophilus
pyn / GB|BAA13512.1: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Geobacillus stearothermophilus
pdp / P77836: pyrimidine-nucleoside phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Geobacillus stearothermophilus
P77836: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Geobacillus stearothermophilus | 28% id,
91% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory