Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.27' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS04550 BZY95_04565 WP_086508794.1: amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

49% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

42% id,
100% cov

BZY95_RS21775 BZY95_21895 WP_086511983.1: branched-chain amino acid transaminase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

42% id,
97% cov

BZY95_RS16860 BZY95_16955 WP_086511056.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana
ISS1 / Q9C969: aromatic aminotransferase ISS1 (EC 2.6.1.27) from Arabidopsis thaliana

26% id,
74% cov

S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur

24% id,
80% cov

BZY95_RS06660 BZY95_06680 WP_086509188.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

26% id,
66% cov

BZY95_RS15720 BZY95_15800 WP_086510842.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur

28% id,
43% cov

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

25% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory