Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS04550 BZY95_04565 WP_086508794.1: amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

49% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

42% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

42% id,
100% cov

hemL BZY95_RS22410 BZY95_12295 WP_176342865.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

37% id,
90% cov

BZY95_RS15720 BZY95_15800 WP_086510842.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
96% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

28% id,
90% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
94% cov

More...

BZY95_RS06660 BZY95_06680 WP_086509188.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
92% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
90% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

22% id,
92% cov

More...

BZY95_RS13490 BZY95_13565 WP_086510442.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
88% cov

BZY95_RS01045 BZY95_01050 WP_086508150.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

29% id,
78% cov

gabT BZY95_RS15480 BZY95_15555 WP_086510803.1: 4-aminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

27% id,
71% cov

BZY95_RS16860 BZY95_16955 WP_086511056.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

26% id,
74% cov

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

28% id,
36% cov

BZY95_RS05445 BZY95_05465 WP_086508963.1: PatB family C-S lyase
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

22% id,
87% cov

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

22% id,
81% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

22% id,
83% cov

More...

BZY95_RS19015 BZY95_19130 WP_086511458.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

22% id,
75% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

23% id,
60% cov

V5M241: tyrosine transaminase (EC 2.6.1.5) from Petunia x

22% id,
58% cov

More...

BZY95_RS13005 BZY95_13045 WP_086510349.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

25% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

20276-21652 (frame -1) on NZ_MUMZ01000055.1 Halomonas desiderata SP1 contig_55, whole genome shotgun sequence
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus
Also see hits to annotated proteins above

27% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory