Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS18425 BZY95_18530 WP_235014126.1: ribokinase is similar to:	PaperBLAST
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 99% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 98% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	37% id, 98% cov
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	36% id, 99% cov
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	36% id, 98% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	35% id, 98% cov
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae	34% id, 98% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	36% id, 93% cov
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis	34% id, 97% cov
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe	34% id, 95% cov
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli	33% id, 99% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	33% id, 93% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus	29% id, 99% cov
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major	31% id, 94% cov
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens	30% id, 92% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	31% id, 82% cov
P71913: ribokinase (EC 2.7.1.15) from Mycobacterium tuberculosis	38% id, 50% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	32% id, 57% cov
RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae	34% id, 31% cov
More...

BZY95_RS07810 BZY95_07840 WP_086509383.1: carbohydrate kinase is similar to:	PaperBLAST
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	30% id, 96% cov
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	28% id, 95% cov
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae	28% id, 91% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	26% id, 93% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	28% id, 65% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	25% id, 74% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	31% id, 41% cov
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	32% id, 34% cov
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum	34% id, 30% cov
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	28% id, 34% cov
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus	35% id, 26% cov
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis	30% id, 21% cov
More...

BZY95_RS16175 BZY95_16260 WP_086510996.1: sugar kinase is similar to:	PaperBLAST
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti	27% id, 99% cov
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila	27% id, 93% cov
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans	28% id, 81% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	25% id, 84% cov
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron	31% id, 37% cov
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens	31% id, 28% cov
More...

hldE BZY95_RS15750 BZY95_15830 WP_086510852.1: bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE is similar to:	PaperBLAST
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens	25% id, 92% cov
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana	25% id, 83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory