Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Halomonas desiderata SP1, or try another query

xylB BZY95_RS17220 BZY95_17320 WP_086511125.1: xylulokinase
is similar to:
PaperBLAST

AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

57% id,
99% cov

Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

56% id,
99% cov

mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

55% id,
99% cov

More...

glpK BZY95_RS08930 BZY95_08960 WP_086509598.1: glycerol kinase GlpK
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

28% id,
95% cov

glpK BZY95_RS20090 BZY95_20205 WP_086511666.1: glycerol kinase GlpK
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

28% id,
89% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory