Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 11 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Halomonas desiderata SP1, or try another query

pfkB BZY95_RS07795 BZY95_07825 WP_086509380.1: 1-phosphofructokinase
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

54% id,
100% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

49% id,
100% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

44% id,
97% cov

More...

BZY95_RS18425 BZY95_18530 WP_235014126.1: ribokinase
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

28% id,
92% cov

K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli
Fpk / b2168: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli
fruK / P0AEW9: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli

31% id,
46% cov

K1PF_MYCGE / Q49396: Putative 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Mycoplasma genitalium

27% id,
32% cov

BZY95_RS16175 BZY95_16260 WP_086510996.1: sugar kinase
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

29% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory