Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS07285 BZY95_07305 WP_086509286.1: aspartate kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

72% id,
100% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

71% id,
100% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

72% id,
98% cov

More...

BZY95_RS20540 BZY95_20660 WP_176342944.1: aspartate kinase
is similar to:
PaperBLAST

AK3_ECOLI / P08660: Lysine-sensitive aspartokinase 3; Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III; EC 2.7.2.4 from Escherichia coli
Apk / b4024: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
lysC / P08660: aspartate kinase III (EC 2.7.2.4) from Escherichia coli
P08660: aspartate kinase (EC 2.7.2.4) from Escherichia coli

29% id,
86% cov

Q9RUL9: aspartate kinase (EC 2.7.2.4) from Deinococcus radiodurans

37% id,
63% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

32% id,
66% cov

More...

BZY95_RS05570 BZY95_05590 WP_086508980.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

36% id,
51% cov

AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

25% id,
39% cov

lysA BZY95_RS20455 BZY95_20575 WP_086511731.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

37% id,
42% cov

pyrH BZY95_RS07590 BZY95_07610 WP_086509344.1: UMP kinase
is similar to:
PaperBLAST

AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

30% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory