Curated BLAST
Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 13 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Halomonas desiderata SP1, or try another query
BZY95_RS16570 BZY95_16665 WP_086510992.1: SMP-30/gluconolactonase/LRE family protein is similar to: | PaperBLAST |
HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae | 35% id, 99% cov |
PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae | 35% id, 97% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 35% id, 97% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 36% id, 94% cov |
PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 35% id, 97% cov |
Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 34% id, 97% cov |
Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 36% id, 90% cov |
Shewana3_2088: L-arabinolactonase (EC 3.1.1.15) from Shewanella sp. | 33% id, 97% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii xacC / D4GP31: D-xylono/L-arabinono-1,4-lactonase (EC 3.1.1.15; EC 3.1.1.68) from Haloferax volcanii D4GP31: L-arabinonolactonase (EC 3.1.1.15); xylono-1,4-lactonase (EC 3.1.1.68) from Haloferax volcanii | 33% id, 96% cov |
ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense | 31% id, 93% cov |
More... |
BZY95_RS16655 BZY95_16750 WP_086511018.1: SMP-30/gluconolactonase/LRE family protein is similar to: | PaperBLAST |
Shewana3_2088: L-arabinolactonase (EC 3.1.1.15) from Shewanella sp. | 35% id, 97% cov |
HSERO_RS05225: L-arabinolactonase (EC 3.1.1.15) from Herbaspirillum seropedicae | 33% id, 99% cov |
PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae | 34% id, 96% cov |
PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 34% id, 96% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii xacC / D4GP31: D-xylono/L-arabinono-1,4-lactonase (EC 3.1.1.15; EC 3.1.1.68) from Haloferax volcanii D4GP31: L-arabinonolactonase (EC 3.1.1.15); xylono-1,4-lactonase (EC 3.1.1.68) from Haloferax volcanii | 34% id, 97% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 34% id, 96% cov |
Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 33% id, 96% cov |
Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens | 34% id, 89% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 33% id, 93% cov |
ARALA_AZOBR / Q1JUP5: L-arabinolactonase; EC 3.1.1.15 from Azospirillum brasilense | 31% id, 96% cov |
SMc00883: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Sinorhizobium meliloti | 28% id, 95% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory