Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS09260 BZY95_09290 WP_086509657.1: asparaginase
is similar to:
PaperBLAST

AO353_09960: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

40% id,
97% cov

A0A1I0U0N3: asparaginase (EC 3.5.1.1) from Pseudomonas otitidis

38% id,
99% cov

Pf1N1B4_2023: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

38% id,
97% cov

More...

BZY95_RS04830 BZY95_04845 WP_086508842.1: asparaginase
is similar to:
PaperBLAST

ASPG_MYCTU / P9WPX5: L-asparaginase; L-ASNase; L-asparagine amidohydrolase; EC 3.5.1.1 from Mycobacterium tuberculosis

35% id,
98% cov

BPHYT_RS08815: L-asparaginase (EC 3.5.1.1) from Burkholderia phytofirmans

37% id,
92% cov

Q9ZLB9: asparaginase (EC 3.5.1.1) from Helicobacter pylori

33% id,
94% cov

More...

BZY95_RS20265 BZY95_20385 WP_086511697.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

34% id,
19% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

34% id,
18% cov

W0G253: asparaginase (EC 3.5.1.1) from Rhizomucor miehei

32% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory