Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 31 curated entries in PaperBLAST's database that match '3.5.1.9' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halomonas desiderata SP1, or try another query

kynB BZY95_RS01810 BZY95_01820 WP_086508297.1: arylformamidase
is similar to:
PaperBLAST

KYNB_CUPMC / P0C8P4: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Cupriavidus metallidurans
kynB: kynurenine formamidase; EC 3.5.1.9 from Ralstonia metallidurans

60% id,
94% cov

KYNB_BURCJ / B4E9I9: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Burkholderia cenocepacia
B4E9I9: arylformamidase (EC 3.5.1.9) from Burkholderia cenocepacia

57% id,
98% cov

KYNB_PSEAE / Q9I234: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Pseudomonas aeruginosa
kynB: kynurenine formamidase; EC 3.5.1.9 from Pseudomonas aeruginosa
Q9I234: arylformamidase (EC 3.5.1.9) from Pseudomonas aeruginosa

57% id,
96% cov

More...

BZY95_RS08145 BZY95_08175 WP_086509445.1: alpha/beta hydrolase
is similar to:
PaperBLAST

acmF / D6R242: arylformamidase (EC 3.5.1.9) from Streptomyces anulatus

36% id,
85% cov

sibK / C0LTM5: aryl formamidase (EC 3.5.1.9) from Streptosporangium sibiricum

32% id,
89% cov

A0A287B5F1: arylformamidase (EC 3.5.1.9) from Sus scrofa

31% id,
87% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory