Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 12 curated entries in PaperBLAST's database that match '3.5.1.94' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS10465 BZY95_10495 WP_086509871.1: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
is similar to:
PaperBLAST

AO353_29305: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

52% id,
99% cov

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

51% id,
97% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

50% id,
97% cov

More...

BZY95_RS16770 BZY95_16865 WP_086511038.1: type 1 glutamine amidotransferase
is similar to:
PaperBLAST

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

29% id,
95% cov

Sama_2645: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Shewanella amazonensis

33% id,
82% cov

PUUD_ECOLI / P76038: Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli
YcjL / b1298: γ-glutamyl-γ-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli
puuD / GI|58197513: gamma-glutamyl-gamma-aminobutyrate hydrolase; EC 3.5.1.94 from Escherichia coli
puuD / P76038: γ-glutamyl-γ-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli
P76038: gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Escherichia coli

32% id,
81% cov

More...

guaA BZY95_RS06945 BZY95_06965 WP_086509229.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

26% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory