Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halomonas desiderata SP1, or try another query

hutI BZY95_RS09395 BZY95_09425 WP_086509681.1: imidazolonepropionase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

59% id,
94% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

56% id,
99% cov

RR42_RS16905: Imidazolonepropionase (EC 3.5.2.7) from Cupriavidus basilensis

58% id,
93% cov

More...

ureC BZY95_RS08810 BZY95_08840 WP_086509576.1: urease subunit alpha
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

33% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory