Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 7 curated entries in PaperBLAST's database that match '3.5.3.8' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Halomonas desiderata SP1, or try another query

hutG BZY95_RS09390 BZY95_09420 WP_086509680.1: formimidoylglutamase
is similar to:
PaperBLAST

HUTGL_PSEAE / Q9HZ59: Formimidoylglutamase; Formiminoglutamase; Formiminoglutamate hydrolase; EC 3.5.3.8 from Pseudomonas aeruginosa

54% id,
99% cov

BWI76_RS08725: Formiminoglutamase (EC 3.5.3.8) from Klebsiella michiganensis

47% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory