Curated BLAST for Genomes

 

Curated BLAST

Searching in Billgrantia desiderata SP1 (GCF_002151265.1)

Found 23 curated entries in PaperBLAST's database that match '3.6.1.31' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Billgrantia desiderata SP1, or try another query

BZY95_RS07450 BZY95_07470 WP_086509319.1: phosphoribosyl-ATP diphosphatase
is similar to:
PaperBLAST

HP15_3195: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Marinobacter adhaerens

68% id,
100% cov

Psest_3944: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas stutzeri

62% id,
99% cov

PP_5015: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas putida

61% id,
97% cov

More...

mazG BZY95_RS12560 BZY95_12600 WP_086510268.1: nucleoside triphosphate pyrophosphohydrolase
is similar to:
PaperBLAST

Q72CU7: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31) from Desulfovibrio vulgaris
DVU1186: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31) from Desulfovibrio vulgaris

34% id,
100% cov

hisI BZY95_RS18250 BZY95_18355 WP_086511320.1: phosphoribosyl-AMP cyclohydrolase
is similar to:
PaperBLAST

HisE / b2026: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli
hisI / P06989: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli

44% id,
59% cov

HIS2_ARATH / O82768: Histidine biosynthesis bifunctional protein hisIE, chloroplastic; Protein HISTIDINE BIOSYNTHESIS 2; EC 3.5.4.19; EC 3.6.1.31 from Arabidopsis thaliana
At-IE / O82768: phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19; EC 3.6.1.31) from Arabidopsis thaliana

34% id,
49% cov

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

35% id,
14% cov

hisD BZY95_RS10280 BZY95_10310 WP_086509840.1: histidinol dehydrogenase
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

37% id,
51% cov

hisD BZY95_RS04815 BZY95_04830 WP_086508840.1: histidinol dehydrogenase
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

35% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory