Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS06630 BZY95_06650 WP_086509182.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

69% id,
99% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

62% id,
100% cov

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

23% id,
74% cov

BZY95_RS03830 BZY95_03845 WP_086508662.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

47% id,
93% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

36% id,
89% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

35% id,
87% cov

More...

BZY95_RS12100 BZY95_12135 WP_086510183.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

41% id,
94% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

40% id,
89% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

37% id,
81% cov

More...

BZY95_RS06190 BZY95_06210 WP_086509099.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

36% id,
100% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

32% id,
95% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

45% id,
66% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory