Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Halomonas desiderata SP1, or try another query
| lysA BZY95_RS20455 BZY95_20575 WP_086511731.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
G4XUJ8: ornithine decarboxylase (EC 4.1.1.17) from Erythroxylum coca | 28% id, 79% cov |
DCOR1_DROME / P40807: Ornithine decarboxylase 1; ODC; EC 4.1.1.17 from Drosophila melanogaster | 26% id, 83% cov |
AN3846: ornithine decarboxylase; EC 4.1.1.17 from Emericella nidulans | 28% id, 74% cov |
| BZY95_RS11590 BZY95_11625 WP_086510138.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme is similar to: | PaperBLAST |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 30% id, 39% cov |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 29% id, 40% cov |
DCOS_ECOLI / P24169: Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli | 32% id, 34% cov |
| nspC BZY95_RS20545 BZY95_20665 WP_086511747.1: carboxynorspermidine decarboxylase is similar to: | PaperBLAST |
DCOR_TRYBB / P07805: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Trypanosoma brucei | 33% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory