Curated BLAST
Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Halomonas desiderata SP1, or try another query
deoC BZY95_RS14235 BZY95_14315 WP_086510574.1: deoxyribose-phosphate aldolase
is similar to: | PaperBLAST |
DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli
Tlr / b4381: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli
deoC / P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli | 57% id,
100% cov |
DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium | 56% id,
100% cov |
Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae | 55% id,
100% cov |
A0A125YLW2: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Toxoplasma gondii | 41% id,
99% cov |
Q9AIP7: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus mutans | 37% id,
92% cov |
DEOC_PSEU2 / Q4ZMV1: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Pseudomonas syringae | 36% id,
93% cov |
DEOC_BACSU / P39121: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Bacillus subtilis | 37% id,
90% cov |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 36% id,
91% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 35% id,
90% cov |
DEOC_HUMAN / Q9Y315: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Homo sapiens
Q9Y315: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Homo sapiens | 39% id,
80% cov |
DEOC_THET8 / Q5SJ28: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermus thermophilus | 36% id,
84% cov |
deoC / C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp.
C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp. | 37% id,
83% cov |
DEOC_AERPE / Q9Y948: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aeropyrum pernix | 32% id,
84% cov |
A0A1Q2T258: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Haloarcula japonica | 29% id,
79% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory