Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 13 curated entries in PaperBLAST's database that match '4.2.1.18' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 21 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS13290 BZY95_13365 WP_086510402.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

51% id,
96% cov

AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

47% id,
100% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

47% id,
100% cov

More...

BZY95_RS17490 BZY95_17590 WP_086511176.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

45% id,
97% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

37% id,
93% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

39% id,
80% cov

More...

paaF BZY95_RS06815 BZY95_06835 WP_086509213.1: 2,3-dehydroadipyl-CoA hydratase PaaF
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

39% id,
100% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

35% id,
93% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

36% id,
84% cov

More...

BZY95_RS10660 BZY95_10690 WP_086509903.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

38% id,
98% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

33% id,
88% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

30% id,
93% cov

More...

BZY95_RS21575 BZY95_21690 WP_086511946.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

37% id,
99% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

34% id,
94% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

37% id,
80% cov

More...

paaG BZY95_RS06820 BZY95_06840 WP_086509214.1: 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

35% id,
100% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

33% id,
95% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

31% id,
94% cov

More...

BZY95_RS14615 BZY95_14695 WP_086510649.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

35% id,
96% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

29% id,
100% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

32% id,
84% cov

More...

BZY95_RS03335 BZY95_03345 WP_086508572.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

34% id,
95% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

32% id,
97% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

31% id,
97% cov

More...

BZY95_RS21560 BZY95_21675 WP_086511943.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

32% id,
97% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

32% id,
95% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

30% id,
97% cov

More...

BZY95_RS10650 BZY95_10680 WP_086509901.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

33% id,
92% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

30% id,
90% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

30% id,
84% cov

More...

BZY95_RS21580 BZY95_21695 WP_086511947.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

36% id,
84% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

33% id,
88% cov

Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens

27% id,
94% cov

More...

BZY95_RS20370 BZY95_20490 WP_086511718.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

34% id,
88% cov

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

31% id,
76% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

33% id,
70% cov

More...

BZY95_RS20855 BZY95_20975 WP_086511809.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

30% id,
97% cov

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

28% id,
95% cov

liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida

27% id,
95% cov

More...

BZY95_RS20360 BZY95_20480 WP_086511716.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

30% id,
95% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

26% id,
89% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

26% id,
82% cov

More...

BZY95_RS09890 BZY95_09920 WP_086509770.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

39% id,
72% cov

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

31% id,
86% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

38% id,
70% cov

More...

BZY95_RS08195 BZY95_08225 WP_086509455.1: enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

28% id,
96% cov

CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp.

26% id,
97% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

24% id,
91% cov

More...

BZY95_RS13280 BZY95_13355 WP_086510400.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans

53% id,
50% cov

BZY95_RS18885 BZY95_19000 WP_086511433.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti

33% id,
78% cov

F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana

27% id,
81% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

28% id,
75% cov

More...

fadB BZY95_RS15080 BZY95_15155 WP_086510728.1: fatty acid oxidation complex subunit alpha FadB
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

36% id,
66% cov

Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis

36% id,
66% cov

AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus

35% id,
67% cov

More...

BZY95_RS09140 BZY95_09170 WP_086509633.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus

27% id,
79% cov

BZY95_RS01745 BZY95_01755 WP_086508285.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans

40% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

10556-11983 (frame +2) on NZ_MUMZ01000166.1 Halomonas desiderata SP1 contig_166, whole genome shotgun sequence
is similar to:
PaperBLAST

AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens
AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens
Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens
Also see hits to annotated proteins above

36% id,
84% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory