Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 18 curated entries in PaperBLAST's database that match '4.2.1.49' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Halomonas desiderata SP1, or try another query

hutU BZY95_RS09385 BZY95_09415 WP_086509679.1: urocanate hydratase
is similar to:
PaperBLAST

HUTU_PSEPU / P25080: Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Pseudomonas putida
hutU / P25080: urocanase subunit (EC 4.2.1.49) from Pseudomonas putida

83% id,
98% cov

PS417_01720: Urocanate hydratase (EC 4.2.1.49) from Pseudomonas simiae

81% id,
98% cov

AO356_09630: Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens

82% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory