Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.90' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Halomonas desiderata SP1, or try another query
| BZY95_RS06185 BZY95_06205 WP_086509098.1: altronate dehydratase family protein is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 29% id, 91% cov |
| BZY95_RS14785 BZY95_14860 WP_086510675.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 26% id, 92% cov |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 28% id, 82% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 27% id, 83% cov |
| manD BZY95_RS16140 BZY95_16225 WP_086510919.1: D-mannonate dehydratase ManD is similar to: | PaperBLAST |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 26% id, 85% cov |
RHMD_ECOLI / P77215: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Escherichia coli | 25% id, 49% cov |
RHMD_SALTY / Q8ZNF9: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Salmonella typhimurium | 24% id, 49% cov |
| dgoD BZY95_RS06130 BZY95_06150 WP_086509088.1: galactonate dehydratase is similar to: | PaperBLAST |
lra3 / Q1NEI8: L-rhamnonate dehydratase (EC 4.2.1.90) from Sphingomonas sp. | 32% id, 65% cov |
A3LZU6: L-rhamnonate dehydratase (EC 4.2.1.90) from Scheffersomyces stipitis | 27% id, 79% cov |
RHMD_POLSJ / Q12DF1: L-rhamnonate dehydratase; RhamD; EC 4.2.1.90 from Polaromonas sp. | 31% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory