Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Halomonas desiderata SP1, or try another query

maiA BZY95_RS06635 BZY95_06655 WP_086509183.1: maleylacetoacetate isomerase
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

61% id,
97% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

58% id,
98% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

57% id,
99% cov

More...

BZY95_RS17610 BZY95_17710 WP_086511196.1: glutathione S-transferase
is similar to:
PaperBLAST

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

30% id,
95% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

26% id,
89% cov

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

27% id,
83% cov

BZY95_RS18035 BZY95_18140 WP_086511273.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

27% id,
95% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

35% id,
45% cov

BZY95_RS12760 BZY95_12800 WP_086510305.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
93% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
93% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

24% id,
94% cov

More...

sspA BZY95_RS10230 BZY95_10260 WP_010629157.1: stringent starvation protein SspA
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

44% id,
46% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

38% id,
52% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

38% id,
41% cov

More...

BZY95_RS09445 BZY95_09475 WP_086509690.1: HTH domain-containing protein
is similar to:
PaperBLAST

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

43% id,
23% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

43% id,
23% cov

MAAI1_DROME / Q9VHD3: Probable maleylacetoacetate isomerase 1; MAAI 1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster

41% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory