Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 12 curated entries in PaperBLAST's database that match '5.3.2.6' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Halomonas desiderata SP1, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

85801-86088 (frame +1) on NZ_MUMZ01000122.1 Halomonas desiderata SP1 contig_122, whole genome shotgun sequence
is similar to:
PaperBLAST

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis

37% id,
100% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory