Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 18 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Halomonas desiderata SP1, or try another query
BZY95_RS14225 BZY95_14305 WP_086510572.1: phosphopentomutase is similar to: | PaperBLAST |
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis | 65% id, 100% cov |
Tlr / b4383: phosphopentomutase (EC 5.4.2.7) from Escherichia coli | 65% id, 100% cov |
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae | 54% id, 100% cov |
glmM BZY95_RS13600 BZY95_13675 WP_086510461.1: phosphoglucosamine mutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 31% id, 94% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 24% id, 58% cov |
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae | 23% id, 50% cov |
BZY95_RS05705 BZY95_05725 WP_086509008.1: phosphomannomutase/phosphoglucomutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 28% id, 96% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 41% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory