Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxybutanoate synthase, catalytic subunit' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS19630 BZY95_19745 WP_086511579.1: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

58% id,
100% cov

gcl BZY95_RS12055 BZY95_12090 WP_086510176.1: glyoxylate carboligase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

35% id,
95% cov

BZY95_RS09495 BZY95_09525 WP_254914188.1: 5-guanidino-2-oxopentanoate decarboxylase
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

31% id,
89% cov

BZY95_RS18470 BZY95_18575 WP_086511357.1: thiamine pyrophosphate-requiring protein
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

26% id,
96% cov

BZY95_RS06700 BZY95_06720 WP_086509196.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

27% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory