Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halomonas desiderata SP1, or try another query

trpE BZY95_RS19935 BZY95_20050 WP_086511648.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

57% id,
100% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

51% id,
97% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

45% id,
97% cov

More...

pabB BZY95_RS20045 BZY95_20160 WP_086511656.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

37% id,
92% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

36% id,
93% cov

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

35% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory