Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS19945 BZY95_20060 WP_086511633.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

61% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

58% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

45% id,
100% cov

carA BZY95_RS13635 BZY95_13710 WP_176342874.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

32% id,
85% cov

BZY95_RS12805 BZY95_12845 WP_086510313.1: glutamine amidotransferase
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
65% cov

BZY95_RS02015 BZY95_02025 WP_086508339.1: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

30% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory