Curated BLAST for Genomes

 

Curated BLAST

Searching in Billgrantia desiderata SP1 (GCF_002151265.1)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Billgrantia desiderata SP1, or try another query

carA BZY95_RS13635 BZY95_13710 WP_176342874.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

43% id,
54% cov

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

43% id,
37% cov

BZY95_RS19945 BZY95_20060 WP_086511633.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

33% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory