Searching in Halomonas desiderata SP1 (GCF_002151265.1)
Found 1 curated entries in PaperBLAST's database that match 'citramalate isomerase small subunit' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Halomonas desiderata SP1, or try another query
| BZY95_RS01750 BZY95_01760 WP_217873765.1: aconitate hydratase is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 33% id, 92% cov |
| leuD BZY95_RS04405 BZY95_04420 WP_086508766.1: 3-isopropylmalate dehydratase small subunit is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 36% id, 74% cov |
| acnA BZY95_RS07660 BZY95_07680 WP_086509356.1: aconitate hydratase AcnA is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 33% id, 65% cov |
| acnD BZY95_RS20065 BZY95_20180 WP_086511660.1: Fe/S-dependent 2-methylisocitrate dehydratase AcnD is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 25% id, 67% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory