Curated BLAST for Genomes

 

Curated BLAST

Searching in Halomonas desiderata SP1 (GCF_002151265.1)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Halomonas desiderata SP1, or try another query

BZY95_RS11675 BZY95_11710 WP_086510096.1: alpha-glucosidase family protein
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

33% id,
98% cov

BZY95_RS01125 BZY95_01130 WP_086508167.1: alpha-amylase family glycosyl hydrolase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

35% id,
91% cov

BZY95_RS11685 BZY95_11720 WP_086510098.1: alpha-amylase family glycosyl hydrolase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

34% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory