Curated BLAST for Genomes

 

Curated BLAST

Searching in Neiella marina J221 (GCF_002165625.1)

Found 12 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Neiella marina J221, or try another query

CBE68_RS14645 WP_087506848.1: fructuronate reductase
is similar to:
PaperBLAST

O08355: mannitol 2-dehydrogenase (EC 1.1.1.67) from Pseudomonas fluorescens

37% id,
98% cov

PfGW456L13_3038: mannitol 2-dehydrogenase (EC 1.1.1.67) from Pseudomonas fluorescens

38% id,
94% cov

DSF1_YEAST / P0CX08: Mannitol dehydrogenase DSF1; Deletion suppressor of MPT5 mutation protein 1; EC 1.1.1.67 from Saccharomyces cerevisiae
MAN2_YEAST / P0CX09: Mannitol dehydrogenase 2; EC 1.1.1.67 from Saccharomyces cerevisiae

35% id,
99% cov

More...

CBE68_RS03625 WP_087504701.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
93% cov

CBE68_RS14650 WP_087506849.1: zinc-binding alcohol dehydrogenase family protein
is similar to:
PaperBLAST

Q9WYD4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Thermotoga maritima

26% id,
100% cov

fabG CBE68_RS16430 WP_087507192.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
94% cov

CBE68_RS14530 WP_229744770.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

26% id,
99% cov

CBE68_RS04670 WP_087504889.1: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

24% id,
98% cov

tdh CBE68_RS18265 WP_087507677.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

Q9WYD4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Thermotoga maritima

29% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

52625-53389 (frame +2) on NZ_NGNS01000026.1 Neiella marina strain J221 contig26, whole genome shotgun sequence
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

27% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory